dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00132
Location and strand information: 5275 - 6399 (+)
Family: 3.A.11.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00133
Location and strand information: 6850 - 8781 (-)
Family: CBM35|PL11|CBM2|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 5.503
Protein molecular weight: 71379.83
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00134
Location and strand information: 9032 - 10156 (+)
Family: GH105
Protein type: CAZyme
Protein description: Unsaturated rhamnogalacturonyl hydrolase YteR
Protein isoelectric point: 8.1093
Protein molecular weight: 43002.01
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00135
Location and strand information: 10691 - 12328 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00136
Location and strand information: 12455 - 14089 (-)
Family: GH28
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.8084
Protein molecular weight: 59865.82
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00137
Location and strand information: 14324 - 15541 (+)
Family: GH154
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9304
Protein molecular weight: 46587.76
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00138
Location and strand information: 15581 - 16804 (+)
Family: GH88
Protein type: CAZyme
Protein description: Unsaturated chondroitin disaccharide hydrolase
Protein isoelectric point: 8.187
Protein molecular weight: 46456.75
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00139
Location and strand information: 16809 - 18869 (+)
Family: GH2
Protein type: CAZyme
Protein description: Beta-galactosidase
Protein isoelectric point: 6.7353
Protein molecular weight: 78409.17
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00140
Location and strand information: 19170 - 21476 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00141
Location and strand information: 21527 - 24787 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00142
Location and strand information: 24799 - 26310 (+)
Family: 8.A.46.1.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00143
Location and strand information: 26318 - 28045 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00144
Location and strand information: 28054 - 29751 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00145
Location and strand information: 29795 - 32920 (+)
Family: 1.B.14.6.2
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00146
Location and strand information: 32926 - 34647 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00147
Location and strand information: 34689 - 36800 (+)
Family: CBM35|PL11|PL11_1
Protein type: CAZyme
Protein description: Rhamnogalacturonan endolyase YesW
Protein isoelectric point: 4.3396
Protein molecular weight: 77907.36
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00148
Location and strand information: 36834 - 37739 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00149
Location and strand information: 37797 - 39458 (+)
Family: null
Protein type: null
Protein description: Putative fimbrium tip subunit Fim1C

Gene clsuter ID: MGYG000000675_2|CGC1
Gene ID: MGYG000000675_00150
Location and strand information: 39478 - 42762 (+)
Family: GH106
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 6.1803
Protein molecular weight: 121532.5
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000675_00133	PL11_e0\|CBM35_e56\|CBM2_e72\|4.2.2.23	pectin
MGYG000000675_00134	GH105_e14\|3.2.1.172	pectin
MGYG000000675_00136	GH28_e22
MGYG000000675_00137
MGYG000000675_00138	GH88_e23\|3.2.1.-	hostglycan
MGYG000000675_00139	GH2_e33
MGYG000000675_00147	PL11_e0\|CBM35_e56\|4.2.2.23	pectin
MGYG000000675_00150	GH106_e9

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000675_00132	hypothetical protein	TC	5275	6399	+	3.A.11.1.3
MGYG000000675_00133	Rhamnogalacturonan endolyase YesW	CAZyme	6850	8781	-	CBM35\| PL11\| CBM2\| PL11_1
MGYG000000675_00134	Unsaturated rhamnogalacturonyl hydrolase YteR	CAZyme	9032	10156	+	GH105
MGYG000000675_00135	hypothetical protein	null	10691	12328	+	Lipase_GDSL_2
MGYG000000675_00136	hypothetical protein	CAZyme	12455	14089	-	GH28
MGYG000000675_00137	hypothetical protein	CAZyme	14324	15541	+	GH154
MGYG000000675_00138	Unsaturated chondroitin disaccharide hydrolase	CAZyme	15581	16804	+	GH88
MGYG000000675_00139	Beta-galactosidase	CAZyme	16809	18869	+	GH2
MGYG000000675_00140	hypothetical protein	null	19170	21476	+	Fasciclin
MGYG000000675_00141	hypothetical protein	TC	21527	24787	+	1.B.14.6.1
MGYG000000675_00142	hypothetical protein	TC	24799	26310	+	8.A.46.1.4
MGYG000000675_00143	hypothetical protein	null	26318	28045	+	Fasciclin\| Fasciclin\| DUF5108
MGYG000000675_00144	hypothetical protein	null	28054	29751	+	Fasciclin
MGYG000000675_00145	TonB-dependent receptor SusC	TC	29795	32920	+	1.B.14.6.2
MGYG000000675_00146	hypothetical protein	null	32926	34647	+	No domain
MGYG000000675_00147	Rhamnogalacturonan endolyase YesW	CAZyme	34689	36800	+	CBM35\| PL11\| PL11_1
MGYG000000675_00148	hypothetical protein	null	36834	37739	+	Mfa_like_1
MGYG000000675_00149	Putative fimbrium tip subunit Fim1C	null	37797	39458	+	Mfa_like_1
MGYG000000675_00150	hypothetical protein	CAZyme	39478	42762	+	GH106
Protein ID	Protein Name	Type	Start	End	Strand	Signature